STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60772.1PFAM: glycosyl transferase family 2; KEGG: amt:Amet_3406 glycosyl transferase family protein. (354 aa)    
Predicted Functional Partners:
AEG60771.1
TIGRFAM: Exosporium BclB-like; KEGG: aac:Aaci_2505 collagen triple helix repeat protein.
 
     0.831
AEG61877.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; KEGG: drm:Dred_3137 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
  
  
 0.571
AEG59482.1
CheW domain protein; KEGG: drm:Dred_2440 CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; P2 response regulator binding domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein.
   
    0.552
AEG59500.1
Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.503
AEG58914.1
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bth:BT_1384 hypothetical protein.
  
    0.480
AEG59509.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
 
 0.462
AEG60764.1
KEGG: cce:Ccel_3349 hypothetical protein.
 
     0.460
AEG60570.1
PFAM: Collagen triple helix repeat-containing protein; KEGG: bcq:BCQ_4541 collagen triple helix repeat domain protein.
 
     0.458
AEG59337.1
PFAM: Lytic transglycosylase catalytic; KEGG: drm:Dred_2511 lytic transglycosylase, catalytic.
  
    0.451
AEG59518.1
PFAM: flagellar hook capping protein; KEGG: drm:Dred_2402 flagellar hook capping protein.
   
    0.447
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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