STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60808.1PFAM: Restriction endonuclease BglII; KEGG: drm:Dred_1461 hypothetical protein. (169 aa)    
Predicted Functional Partners:
AEG60807.1
PFAM: Sporulation lipoprotein YhcN/YlaJ-like; KEGG: drm:Dred_1462 hypothetical protein.
       0.518
AEG60809.1
KEGG: drm:Dred_1460 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
       0.507
AEG60806.1
KEGG: drm:Dred_1463 SpoVA protein; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein.
       0.490
AEG60804.1
KEGG: drm:Dred_1465 SpoVA protein; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein.
       0.475
AEG60805.1
KEGG: drm:Dred_1464 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein.
       0.475
AEG60803.1
PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: drm:Dred_1466 hypothetical protein.
       0.461
AEG60802.1
PFAM: protein of unknown function DUF1657; KEGG: drm:Dred_1467 hypothetical protein.
       0.422
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.