STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60818.1PFAM: Uncharacterised protein family UPF0324; KEGG: drm:Dred_1452 hypothetical protein. (496 aa)    
Predicted Functional Partners:
AEG60817.1
KEGG: dhd:Dhaf_0246 hypothetical protein.
       0.721
AEG61937.1
KEGG: drm:Dred_3200 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
     0.573
AEG59325.1
PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1264 hypothetical protein.
 
    0.545
AEG59933.1
KEGG: drm:Dred_2122 hypothetical protein.
  
     0.522
AEG60853.1
KEGG: drm:Dred_1428 hypothetical protein.
  
     0.522
AEG58905.1
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: drm:Dred_2929 heat domain-containing protein.
 
     0.519
AEG60856.1
KEGG: drm:Dred_1426 hypothetical protein.
  
     0.519
AEG60336.1
KEGG: drm:Dred_3274 hypothetical protein.
  
     0.498
AEG60857.1
PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1425 hypothetical protein.
 
    0.488
AEG61923.1
TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; KEGG: drm:Dred_3186 sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
 
     0.475
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.