STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60829.1PFAM: Polysulphide reductase NrfD; KEGG: drm:Dred_1116 polysulphide reductase, NrfD. (376 aa)    
Predicted Functional Partners:
AEG60828.1
KEGG: drm:Dred_0462 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 0.970
AEG61635.1
KEGG: drm:Dred_0462 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 0.927
AEG61222.1
KEGG: drm:Dred_1115 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 0.926
AEG58714.1
KEGG: drm:Dred_1115 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 0.925
AEG59792.1
KEGG: dhd:Dhaf_0208 hypothetical protein.
   
 
 0.801
AEG61223.1
Nitrate reductase; KEGG: drm:Dred_1114 formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.784
AEG58713.1
Nitrate reductase; KEGG: drm:Dred_1114 formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.778
AEG58712.1
PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: drm:Dred_1113 formate dehydrogenase.
 
 
 0.753
AEG61224.1
PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: drm:Dred_1113 formate dehydrogenase.
 
 
 0.745
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.732
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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