STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60844.1PFAM: protein of unknown function DUF107; KEGG: dhd:Dhaf_3316 protein of unknown function DUF107. (176 aa)    
Predicted Functional Partners:
AEG60843.1
KEGG: dhd:Dhaf_3314 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein.
 
  
 0.991
AEG60845.1
PFAM: PspA/IM30 family protein; KEGG: dhd:Dhaf_3317 phage shock protein A, PspA.
 
    0.765
cobS
Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.739
AEG58722.1
PFAM: major facilitator superfamily MFS_1; KEGG: cbe:Cbei_0977 major facilitator transporter.
  
     0.646
AEG60842.1
PFAM: nitroreductase; KEGG: aar:Acear_1505 nitroreductase.
       0.589
AEG58381.1
KEGG: dhd:Dhaf_2268 ATP-dependent DNA helicase replicase.
  
    0.584
AEG59419.1
PFAM: protein of unknown function DUF107; KEGG: drm:Dred_2489 hypothetical protein.
  
  
 0.575
AEG61500.1
PFAM: GCN5-related N-acetyltransferase; KEGG: bld:BLi02771 hypothetical protein.
  
  
 0.558
AEG59119.1
KEGG: dsy:DSY2713 hypothetical protein.
  
     0.548
AEG60980.1
ATP-binding region ATPase domain protein; KEGG: bss:BSUW23_17900 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor transmembrane region; glycoside hydrolase family 2 sugar binding; response regulator receiver; histidine kinase internal region; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver.
 
    0.499
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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