STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60849.1KEGG: drm:Dred_1607 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein. (162 aa)    
Predicted Functional Partners:
AEG60940.1
PFAM: hypothetical protein; KEGG: drm:Dred_1314 hypothetical protein.
  
     0.744
AEG59575.1
KEGG: drm:Dred_2345 pyrrolo-quinoline quinone.
  
     0.721
AEG61975.1
KEGG: drm:Dred_2787 hypothetical protein.
  
     0.718
AEG61978.1
KEGG: drm:Dred_2787 hypothetical protein.
  
     0.716
AEG61093.1
KEGG: drm:Dred_1516 hypothetical protein.
  
     0.699
AEG61205.1
KEGG: drm:Dred_0322 Fis family transcriptional regulator.
  
     0.694
AEG60218.1
KEGG: drm:Dred_1904 hypothetical protein.
  
     0.659
AEG59325.1
PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1264 hypothetical protein.
  
     0.649
AEG60058.1
PFAM: AAA-4 family protein; KEGG: drm:Dred_2059 putative transcriptional regulator.
  
     0.640
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.634
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.