STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60886.1PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2917 S-layer domain-containing protein. (755 aa)    
Predicted Functional Partners:
AEG60889.1
KEGG: drm:Dred_1355 hypothetical protein.
 
    0.845
AEG60890.1
PFAM: WD40-like beta Propeller containing protein; KEGG: drm:Dred_1354 WD40 domain-containing protein.
 
     0.782
AEG61302.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_1055 copper amine oxidase domain-containing protein.
  
    0.778
AEG58911.1
KEGG: drm:Dred_2923 hypothetical protein.
  
     0.761
AEG61979.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_0939 copper amine oxidase domain-containing protein.
  
     0.758
AEG61976.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: pth:PTH_0168 hypothetical protein.
  
     0.757
AEG61077.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: pth:PTH_2788 hypothetical protein.
 
    0.744
AEG59722.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_0914 copper amine oxidase domain-containing protein.
  
    0.739
AEG58963.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_0939 copper amine oxidase domain-containing protein.
  
     0.738
AEG60766.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_0914 copper amine oxidase domain-containing protein.
  
     0.734
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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