STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60921.1KEGG: drm:Dred_1330 formate dehydrogenase; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein. (371 aa)    
Predicted Functional Partners:
AEG61578.1
PFAM: methyl-viologen-reducing hydrogenase delta subunit; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: drm:Dred_0639 methyl-viologen-reducing hydrogenase, delta subunit.
 
 
 0.978
AEG60922.1
KEGG: drm:Dred_1329 methyl-viologen-reducing hydrogenase, delta subunit; manually curated; PFAM: methyl-viologen-reducing hydrogenase delta subunit.
 
 
 0.977
AEG60924.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: drm:Dred_1327 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 
 0.967
AEG60925.1
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_1326 hypothetical protein.
 
 
 0.963
AEG60923.1
PFAM: FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: drm:Dred_1328 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 
 0.957
AEG58507.1
PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: drm:Dred_0146 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
  
 
0.927
AEG58506.1
KEGG: dae:Dtox_1278 methyl-viologen-reducing hydrogenase delta subunit; manually curated; PFAM: methyl-viologen-reducing hydrogenase delta subunit.
 
 
 0.917
AEG58513.1
KEGG: dae:Dtox_1278 methyl-viologen-reducing hydrogenase delta subunit; manually curated; PFAM: methyl-viologen-reducing hydrogenase delta subunit.
 
 
 0.917
AEG61525.1
TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; KEGG: drm:Dred_0652 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane.
  
  
  0.913
AEG61579.1
PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_0638 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 
 0.904
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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