STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60937.1PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1316 hypothetical protein. (338 aa)    
Predicted Functional Partners:
AEG60941.1
PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1313 hypothetical protein.
  
     0.727
AEG60938.1
KEGG: bmq:BMQ_3615 major facilitator superfamily transporter.
       0.709
AEG60856.1
KEGG: drm:Dred_1426 hypothetical protein.
 
     0.609
AEG60853.1
KEGG: drm:Dred_1428 hypothetical protein.
 
     0.608
AEG60936.1
PFAM: transposase IS3/IS911 family protein; KEGG: bmj:BMULJ_05181 ISBmu5a transposase.
       0.563
AEG59325.1
PFAM: protein of unknown function DUF81; KEGG: drm:Dred_1264 hypothetical protein.
  
     0.543
AEG60935.1
PFAM: Integrase catalytic region; KEGG: bca:BCE_A0056 IS3 family transposase OrfB.
       0.535
AEG60830.1
PFAM: protein of unknown function UPF0153; KEGG: drm:Dred_1442 hypothetical protein.
  
     0.530
AEG60646.1
PFAM: protein of unknown function UPF0153; KEGG: drm:Dred_1650 hypothetical protein.
  
     0.522
AEG60412.1
PFAM: protein of unknown function DUF81; KEGG: drm:Dred_0424 hypothetical protein.
  
     0.478
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.