STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60968.1PFAM: Extracellular ligand-binding receptor; KEGG: drm:Dred_2935 extracellular ligand-binding receptor. (391 aa)    
Predicted Functional Partners:
AEG60966.1
PFAM: inner-membrane translocator; KEGG: drm:Dred_2933 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.957
AEG60967.1
PFAM: inner-membrane translocator; KEGG: drm:Dred_2934 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.954
AEG60965.1
KEGG: drm:Dred_2932 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.944
AEG60964.1
KEGG: drm:Dred_2931 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.933
AEG60538.1
PFAM: inner-membrane translocator; KEGG: drm:Dred_2238 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.893
AEG60539.1
PFAM: inner-membrane translocator; KEGG: drm:Dred_2239 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.886
AEG60532.1
PFAM: inner-membrane translocator; KEGG: drm:Dred_1722 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.885
AEG60533.1
PFAM: inner-membrane translocator; KEGG: drm:Dred_1721 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.881
AEG60537.1
KEGG: drm:Dred_2237 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.867
AEG58775.1
PFAM: inner-membrane translocator; KEGG: pth:PTH_0460 ABC-type branched-chain amino acid transport system, permeasecomponent.
 
  
 0.852
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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