STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG60991.1KEGG: drm:Dred_2028 hypothetical protein. (103 aa)    
Predicted Functional Partners:
AEG62086.1
PFAM: Colicin V production protein; KEGG: drm:Dred_3312 hypothetical protein.
  
     0.720
AEG61975.1
KEGG: drm:Dred_2787 hypothetical protein.
  
     0.659
AEG60948.1
KEGG: drm:Dred_1310 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region.
  
     0.658
AEG61978.1
KEGG: drm:Dred_2787 hypothetical protein.
  
     0.657
AEG60940.1
PFAM: hypothetical protein; KEGG: drm:Dred_1314 hypothetical protein.
  
     0.654
AEG61514.1
KEGG: drm:Dred_0711 hypothetical protein.
  
     0.654
AEG60282.1
KEGG: drm:Dred_1513 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein.
  
     0.650
AEG61205.1
KEGG: drm:Dred_0322 Fis family transcriptional regulator.
  
     0.635
AEG58336.1
PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: dae:Dtox_3161 hypothetical protein.
  
     0.617
AEG59484.1
KEGG: drm:Dred_2438 putative anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein.
  
     0.586
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.