STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61013.1TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: drm:Dred_1279 putative CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type. (258 aa)    
Predicted Functional Partners:
AEG61014.1
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: drm:Dred_1278 2-hydroxyglutaryl-CoA dehydratase, D-component.
 
 0.996
AEG61197.1
PFAM: Protein of unknown function DUF2229, CoA enzyme activase; KEGG: drm:Dred_1121 hypothetical protein.
     0.931
AEG59204.1
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: drm:Dred_2688 2-hydroxyglutaryl-CoA dehydratase, D-component.
 
 0.699
AEG61060.1
KEGG: drm:Dred_1242 SirA family protein; TIGRFAM: selenium metabolism protein YedF; PFAM: SirA-like domain-containing protein; Belongs to the sulfur carrier protein TusA family.
 
     0.595
asnS
KEGG: drm:Dred_1281 asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type.
       0.509
AEG61196.1
KEGG: drm:Dred_1122 hypothetical protein.
   
 0.481
AEG61015.1
Hypothetical protein.
       0.474
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.