Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEG61016.1KEGG: pth:PTH_2121 hypothetical protein. (367 aa)    
Predicted Functional Partners:
AEG60635.1
Hydrogenase, Fe-only; KEGG: drm:Dred_1654 hydrogenases, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit.
  
 
 0.765
AEG60639.1
Hydrogenase, Fe-only; KEGG: drm:Dred_1651 hydrogenases, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit.
  
 
 0.765
AEG61017.1
KEGG: drm:Dred_1276 hypothetical protein.
       0.754
AEG61018.1
PFAM: protein of unknown function DUF503; KEGG: drm:Dred_1275 hypothetical protein.
       0.736
AEG58394.1
KEGG: dae:Dtox_0610 protein of unknown function DUF362.
 
     0.563
htpX-2
PFAM: peptidase M48 Ste24p; KEGG: drm:Dred_1274 peptidase M48, Ste24p; Belongs to the peptidase M48B family.
       0.559
AEG60209.1
KEGG: pth:PTH_1310 hypothetical protein.
  
     0.453
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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