STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61025.1PFAM: Protein of unknown function DUF2089; KEGG: dae:Dtox_2520 hypothetical protein. (123 aa)    
Predicted Functional Partners:
AEG61026.1
KEGG: dae:Dtox_2519 hypothetical protein.
 
     0.955
AEG61028.1
PFAM: membrane protein of unknown function; KEGG: dae:Dtox_2517 membrane protein of unknown function.
       0.694
AEG61027.1
KEGG: dae:Dtox_2518 hypothetical protein.
       0.678
AEG61021.1
PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_1272 major facilitator transporter.
 
     0.439
AEG61024.1
PFAM: Redoxin domain protein; KEGG: apv:Apar_0089 redoxin domain protein.
       0.416
AEG60306.1
PFAM: major facilitator superfamily MFS_1; KEGG: amt:Amet_1904 major facilitator transporter.
  
     0.413
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.