STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61054.1KEGG: pth:PTH_1661 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain. (196 aa)    
Predicted Functional Partners:
AEG61055.1
Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 0.972
AEG61926.1
Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 0.881
AEG61053.1
Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
    0.861
AEG58401.1
PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: drm:Dred_0048 thiamine pyrophosphate binding domain-containing protein.
 
 
 0.783
AEG61257.1
PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: hor:Hore_06790 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), beta subunit.
 
 
 0.781
AEG61058.1
ABC transporter related protein; KEGG: pth:PTH_1657 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.780
AEG60521.1
2-oxoglutarate synthase; KEGG: hmo:HM1_2763 2-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein.
  
 
 0.753
AEG61056.1
PFAM: cobalt transport protein; KEGG: pth:PTH_1659 ABC-type cobalt transport system, permease component CbiQ and related transporters.
       0.746
AEG61057.1
ABC transporter related protein; KEGG: pth:PTH_1658 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.746
AEG61059.1
KEGG: pth:PTH_1656 hypothetical protein.
       0.670
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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