STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61079.1KEGG: drm:Dred_1497 hypothetical protein. (183 aa)    
Predicted Functional Partners:
AEG61093.1
KEGG: drm:Dred_1516 hypothetical protein.
  
     0.655
AEG61078.1
Regulatory protein MarR; KEGG: dae:Dtox_2795 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
 
     0.643
AEG61664.1
PFAM: carbonic anhydrase; KEGG: drm:Dred_0448 hypothetical protein.
  
     0.618
AEG59055.1
KEGG: dae:Dtox_1722 hypothetical protein.
  
     0.434
AEG61978.1
KEGG: drm:Dred_2787 hypothetical protein.
  
     0.434
AEG58342.1
KEGG: dae:Dtox_0495 hypothetical protein.
  
     0.433
AEG61975.1
KEGG: drm:Dred_2787 hypothetical protein.
  
     0.431
AEG59887.1
KEGG: drm:Dred_2162 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4.
     
 0.421
AEG58848.1
KEGG: drm:Dred_2959 hypothetical protein.
  
     0.411
AEG61247.1
PFAM: small acid-soluble spore protein alpha/beta type; KEGG: drm:Dred_1096 small acid-soluble spore protein, alpha/beta type.
  
     0.411
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.