STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61083.1KEGG: dae:Dtox_0386 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B. (198 aa)    
Predicted Functional Partners:
AEG61429.1
ATP-binding region ATPase domain protein; KEGG: dae:Dtox_3198 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
  
  0.941
AEG61428.1
KEGG: dae:Dtox_3199 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B.
  
  
 
0.926
AEG59861.1
PFAM: ATP-binding region ATPase domain protein; KEGG: cpy:Cphy_1601 signal transduction histidine kinase regulating citrate/malate metabolism.
    
  0.902
AEG61082.1
ATP-binding region ATPase domain protein; KEGG: dae:Dtox_0385 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
     0.850
AEG61081.1
KEGG: dae:Dtox_0384 hypothetical protein.
       0.778
AEG61084.1
KEGG: dae:Dtox_0387 hypothetical protein.
       0.705
AEG61085.1
LytTr DNA-binding region; KEGG: dae:Dtox_0388 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver.
  
  
 0.693
AEG58746.1
KEGG: dae:Dtox_3371 O-antigen polymerase.
  
     0.642
AEG58769.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: drm:Dred_1269 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein.
  
  
 0.611
AEG61180.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-4 domain protein; KEGG: drm:Dred_1139 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein.
  
  
 0.611
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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