STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61091.1KEGG: dae:Dtox_2733 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (626 aa)    
Predicted Functional Partners:
AEG61092.1
KEGG: pjd:Pjdr2_2052 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
    
0.896
AEG61350.1
KEGG: ate:Athe_1803 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase.
 
 
   
0.670
AEG61095.1
KEGG: drm:Dred_1514 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.659
AEG59662.1
KEGG: drm:Dred_2269 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
   
0.656
AEG60242.1
KEGG: drm:Dred_1880 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
   
 0.625
AEG61093.1
KEGG: drm:Dred_1516 hypothetical protein.
       0.546
AEG61094.1
KEGG: drm:Dred_1515 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
       0.546
AEG61090.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_2744 hypothetical protein.
       0.497
AEG58732.1
KEGG: bcy:Bcer98_0345 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     
0.492
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.490
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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