STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61096.1KEGG: hmo:HM1_1252 hypothetical protein. (237 aa)    
Predicted Functional Partners:
AEG61880.1
KEGG: dae:Dtox_4152 outer membrane protein-like protein.
 
 
 0.698
AEG59217.1
KEGG: drm:Dred_0321 outer membrane protein-like protein.
  
 
 0.648
AEG60906.1
PFAM: AIG2 family protein; KEGG: dre:100149204 si:ch211-149a19.5.
  
     0.515
AEG58342.1
KEGG: dae:Dtox_0495 hypothetical protein.
 
  
 0.497
AEG59916.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
  
  
 0.471
AEG61097.1
PFAM: amino acid permease-associated region; KEGG: clj:CLJU_c16020 putative aminoacid permease.
       0.462
hisI
phosphoribosyl-ATP diphosphatase; KEGG: drm:Dred_2349 phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like; In the N-terminal section; belongs to the PRA-CH family.
  
    0.450
AEG60981.1
S-layer domain-containing protein; KEGG: pjd:Pjdr2_0886 cell wall/surface repeat protein; PFAM: S-layer domain-containing protein; Fibronectin type III domain protein; SMART: Immunoglobulin subtype; Immunoglobulin C2 type; Fibronectin type III domain protein.
  
    0.414
AEG60164.1
Hypothetical protein; Manually curated; KEGG: tjr:TherJR_1383 hypothetical protein.
  
     0.402
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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