STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61101.1KEGG: dhd:Dhaf_0985 4Fe-4S ferredoxin iron-sulfur binding domain protein. (353 aa)    
Predicted Functional Partners:
AEG61934.1
TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; KEGG: drm:Dred_3197 DsrC family protein; PFAM: DsrC family protein.
   
 
 0.770
AEG59685.1
KEGG: dhd:Dhaf_1656 hypothetical protein.
  
     0.678
AEG60763.1
PFAM: Collagen triple helix repeat-containing protein; KEGG: dhd:Dhaf_1008 collagen triple helix repeat protein.
  
     0.570
AEG59711.1
KEGG: dhd:Dhaf_2195 hypothetical protein.
  
     0.564
AEG61135.1
KEGG: dhd:Dhaf_3297 putative ABC transporter.
  
     0.561
AEG60986.1
PFAM: regulatory protein TetR; KEGG: dsy:DSY2813 hypothetical protein.
  
     0.477
AEG61102.1
Sporulation protein YtaF; Probably functions as a manganese efflux pump.
       0.412
AEG61728.1
KEGG: dhd:Dhaf_0677 hypothetical protein.
  
     0.405
AEG61137.1
PFAM: regulatory protein TetR; KEGG: dhd:Dhaf_3295 transcriptional regulator, TetR family.
  
     0.401
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.