STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61152.1KEGG: drm:Dred_1156 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein. (426 aa)    
Predicted Functional Partners:
AEG61153.1
PFAM: protein of unknown function DUF1614; KEGG: drm:Dred_1155 Fis family transcriptional regulator.
     0.980
AEG61294.1
KEGG: drm:Dred_1063 hypothetical protein.
  
   
 0.830
AEG59423.1
Sporulation protein YqfD; KEGG: drm:Dred_2485 putative stage IV sporulation YqfD; TIGRFAM: sporulation protein YqfD; PFAM: stage IV sporulation YqfD.
  
   
 0.785
AEG58486.1
KEGG: drm:Dred_0117 SpoIID/LytB domain-containing protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D.
  
  
 0.763
AEG61151.1
KEGG: drm:Dred_1157 hypothetical protein.
 
     0.734
AEG60196.1
KEGG: drm:Dred_1924 hypothetical protein.
  
     0.725
AEG61299.1
TIGRFAM: stage III sporulation protein AC; KEGG: drm:Dred_1058 stage III sporulation AC family protein.
  
  
 0.725
AEG58489.1
KEGG: drm:Dred_0118 YabP family protein; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein.
  
   
 0.720
AEG58451.1
KEGG: drm:Dred_0082 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
   
 0.712
AEG61144.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
 
   
 0.709
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.