STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61213.1PFAM: CRISPR-associated protein TM1802; KEGG: drm:Dred_0536 hypothetical protein. (673 aa)    
Predicted Functional Partners:
AEG61211.1
TIGRFAM: CRISPR-associated protein Cas5; KEGG: drm:Dred_0538 CRISPR-associated Cas5 family Hmari subtype protein.
 
    0.947
AEG61212.1
KEGG: drm:Dred_0537 CRISPR-associated Csh2 family protein; TIGRFAM: CRISPR-associated protein, Csh2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801.
 
    0.913
AEG61210.1
TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: drm:Dred_0539 CRISPR-associated helicase Cas3; SMART: DEAD-like helicase; helicase domain protein.
 
     0.875
AEG60058.1
PFAM: AAA-4 family protein; KEGG: drm:Dred_2059 putative transcriptional regulator.
  
     0.774
AEG61121.1
PFAM: Ion transport 2 domain protein; KEGG: drm:Dred_1173 ion transport 2 domain-containing protein.
  
     0.774
AEG60940.1
PFAM: hypothetical protein; KEGG: drm:Dred_1314 hypothetical protein.
  
     0.773
AEG59259.1
PFAM: SMC domain protein; KEGG: drm:Dred_2570 SMC domain-containing protein.
  
     0.772
AEG59140.1
KEGG: drm:Dred_2743 hypothetical protein.
  
     0.769
AEG60218.1
KEGG: drm:Dred_1904 hypothetical protein.
  
     0.764
AEG61618.1
KEGG: drm:Dred_0480 hypothetical protein.
  
     0.763
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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