STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61247.1PFAM: small acid-soluble spore protein alpha/beta type; KEGG: drm:Dred_1096 small acid-soluble spore protein, alpha/beta type. (98 aa)    
Predicted Functional Partners:
AEG61585.1
PFAM: protein of unknown function UPF0153; KEGG: drm:Dred_0632 hypothetical protein.
  
     0.706
AEG60032.1
PFAM: Mor transcription activator domain protein; KEGG: dae:Dtox_4221 Mor transcription activator domain protein.
  
     0.671
AEG59484.1
KEGG: drm:Dred_2438 putative anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein.
  
     0.622
AEG59477.1
KEGG: drm:Dred_2445 hypothetical protein.
  
     0.617
AEG60830.1
PFAM: protein of unknown function UPF0153; KEGG: drm:Dred_1442 hypothetical protein.
  
     0.561
AEG59820.1
KEGG: drm:Dred_2201 hypothetical protein.
  
     0.551
AEG58451.1
KEGG: drm:Dred_0082 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
     0.549
AEG58850.1
KEGG: drm:Dred_2201 hypothetical protein.
  
     0.547
AEG58848.1
KEGG: drm:Dred_2959 hypothetical protein.
  
     0.546
AEG61093.1
KEGG: drm:Dred_1516 hypothetical protein.
  
     0.545
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.