STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61255.1KEGG: drm:Dred_1092 peptidase T-like protein; TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein. (375 aa)    
Predicted Functional Partners:
AEG61254.1
KEGG: bpf:BpOF4_16635 hypothetical protein.
       0.773
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
    
 0.676
AEG61252.1
KEGG: drm:Dred_1093 hypothetical protein.
       0.656
AEG59457.1
PFAM: protein of unknown function DUF34; KEGG: drm:Dred_2459 hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
  
    0.641
AEG60375.1
PFAM: peptidase M24; creatinase; KEGG: aac:Aaci_1001 peptidase M24; Belongs to the peptidase M24B family.
  
 
 0.593
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.580
AEG61307.1
PFAM: peptidase M24; creatinase; KEGG: drm:Dred_1051 peptidase M24.
 
 
 0.580
AEG61253.1
KEGG: mfa:Mfla_2316 cyclic nucleotide-binding domain-containing protein.
       0.576
AEG61258.1
3-methyl-2-oxobutanoate dehydrogenase (ferredoxin); KEGG: adg:Adeg_1385 2-ketoisovalerate ferredoxin reductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
     
 0.561
AEG59500.1
Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
   
   0.559
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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