STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61289.1PFAM: Protein of unknown function DUF2273; KEGG: drm:Dred_1068 hypothetical protein. (73 aa)    
Predicted Functional Partners:
AEG61290.1
PFAM: protein of unknown function DUF322; KEGG: drm:Dred_1067 hypothetical protein.
 
     0.901
AEG61296.1
PFAM: Sporulation stage III protein AF; KEGG: drm:Dred_1061 hypothetical protein.
 
     0.722
AEG61104.1
KEGG: drm:Dred_2587 hypothetical protein.
  
     0.721
nusB
Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
       0.717
AEG59410.1
PFAM: chaperonin Cpn60/TCP-1; KEGG: drm:Dred_2498 chaperonin Cpn60/TCP-1.
  
     0.698
AEG61152.1
KEGG: drm:Dred_1156 stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein.
  
     0.698
AEG60478.1
KEGG: drm:Dred_1746 hypothetical protein.
  
     0.697
AEG60695.1
KEGG: drm:Dred_1636 hypothetical protein.
  
     0.676
AEG61291.1
PFAM: protein of unknown function DUF322; KEGG: drm:Dred_1066 hypothetical protein.
       0.656
AEG59543.1
KEGG: drm:Dred_2377 hypothetical protein.
  
     0.635
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.