STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61301.1KEGG: drm:Dred_1056 hypothetical protein; TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase. (337 aa)    
Predicted Functional Partners:
AEG61300.1
KEGG: drm:Dred_1057 stage III sporulation protein SpoAB; TIGRFAM: stage III sporulation protein AB; PFAM: Sporulation stage III protein AB.
 
  
 0.999
AEG61299.1
TIGRFAM: stage III sporulation protein AC; KEGG: drm:Dred_1058 stage III sporulation AC family protein.
 
  
 0.988
AEG61295.1
KEGG: drm:Dred_1062 hypothetical protein.
 
  
 0.981
AEG61297.1
KEGG: drm:Dred_1060 hypothetical protein; TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE.
 
  
 0.978
AEG61298.1
TIGRFAM: stage III sporulation protein AD; KEGG: drm:Dred_1059 putative sporulation protein.
 
  
 0.972
AEG61294.1
KEGG: drm:Dred_1063 hypothetical protein.
 
  
 0.971
AEG61144.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.899
AEG61883.1
TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: drm:Dred_3145 regulatory protein, DeoR.
  
   
 0.892
AEG61296.1
PFAM: Sporulation stage III protein AF; KEGG: drm:Dred_1061 hypothetical protein.
  
  
 0.871
AEG61540.1
Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
  
 0.869
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.