STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61311.1PFAM: peptidase U62 modulator of DNA gyrase; KEGG: drm:Dred_1032 peptidase U62, modulator of DNA gyrase. (476 aa)    
Predicted Functional Partners:
AEG61313.1
PFAM: Fimbrial assembly family protein; KEGG: adg:Adeg_1717 fimbrial assembly family protein.
 
     0.670
AEG61309.1
PFAM: peptidase U62 modulator of DNA gyrase; KEGG: drm:Dred_1049 peptidase U62, modulator of DNA gyrase.
 
    
0.647
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
      0.619
AEG61314.1
TIGRFAM: type IV pilus assembly protein PilM; KEGG: dau:Daud_0998 type IV pilus assembly protein PilM.
       0.602
AEG61312.1
Hypothetical protein; KEGG: cdl:CDR20291_3346 putative type IV pilus assembly protein.
       0.597
AEG61315.1
KEGG: dau:Daud_0994 N-terminal methylation protein.
       0.492
AEG61316.1
KEGG: mta:Moth_1546 hypothetical protein.
       0.478
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
       0.424
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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