STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61312.1Hypothetical protein; KEGG: cdl:CDR20291_3346 putative type IV pilus assembly protein. (272 aa)    
Predicted Functional Partners:
AEG61313.1
PFAM: Fimbrial assembly family protein; KEGG: adg:Adeg_1717 fimbrial assembly family protein.
  
 
 0.975
AEG61314.1
TIGRFAM: type IV pilus assembly protein PilM; KEGG: dau:Daud_0998 type IV pilus assembly protein PilM.
  
 
 0.925
AEG61315.1
KEGG: dau:Daud_0994 N-terminal methylation protein.
  
  
 0.781
AEG61316.1
KEGG: mta:Moth_1546 hypothetical protein.
  
  
 0.715
AEG61317.1
KEGG: toc:Toce_1924 hypothetical protein.
  
  
 0.638
AEG61318.1
KEGG: toc:Toce_1925 hypothetical protein.
     
 0.623
AEG61321.1
PFAM: Type II secretion system F domain; KEGG: dau:Daud_0970 type II secretion system protein.
   
 
 0.576
AEG61311.1
PFAM: peptidase U62 modulator of DNA gyrase; KEGG: drm:Dred_1032 peptidase U62, modulator of DNA gyrase.
       0.571
AEG61323.1
KEGG: dau:Daud_0991 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
  
 
 0.543
AEG61319.1
Hypothetical protein; KEGG: toc:Toce_1927 N-terminal methylation.
  
  
 0.514
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.