STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61314.1TIGRFAM: type IV pilus assembly protein PilM; KEGG: dau:Daud_0998 type IV pilus assembly protein PilM. (349 aa)    
Predicted Functional Partners:
AEG61313.1
PFAM: Fimbrial assembly family protein; KEGG: adg:Adeg_1717 fimbrial assembly family protein.
  
 
 0.990
AEG61312.1
Hypothetical protein; KEGG: cdl:CDR20291_3346 putative type IV pilus assembly protein.
  
 
 0.926
AEG61321.1
PFAM: Type II secretion system F domain; KEGG: dau:Daud_0970 type II secretion system protein.
 
 
 
 0.920
AEG61323.1
KEGG: dau:Daud_0991 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
 
 
 0.899
AEG58753.1
PFAM: Type II secretion system F domain; KEGG: dae:Dtox_2664 type II secretion system protein.
 
 
 
 0.878
AEG58751.1
KEGG: dae:Dtox_2665 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
 
 
 0.859
AEG61320.1
KEGG: toc:Toce_1927 N-terminal methylation.
 
  
 0.844
AEG61322.1
TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: adg:Adeg_1724 twitching motility protein; SMART: AAA ATPase.
 
   
 0.840
AEG61315.1
KEGG: dau:Daud_0994 N-terminal methylation protein.
 
  
 0.828
AEG58750.1
TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: dae:Dtox_2666 twitching motility protein; SMART: AAA ATPase.
 
   
 0.801
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.