STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61316.1KEGG: mta:Moth_1546 hypothetical protein. (311 aa)    
Predicted Functional Partners:
AEG61317.1
KEGG: toc:Toce_1924 hypothetical protein.
  
  
 0.943
AEG61318.1
KEGG: toc:Toce_1925 hypothetical protein.
  
  
 0.940
AEG61315.1
KEGG: dau:Daud_0994 N-terminal methylation protein.
  
  
 0.787
AEG61314.1
TIGRFAM: type IV pilus assembly protein PilM; KEGG: dau:Daud_0998 type IV pilus assembly protein PilM.
     
 0.751
AEG61312.1
Hypothetical protein; KEGG: cdl:CDR20291_3346 putative type IV pilus assembly protein.
  
  
 0.698
AEG61313.1
PFAM: Fimbrial assembly family protein; KEGG: adg:Adeg_1717 fimbrial assembly family protein.
     
 0.694
AEG61319.1
Hypothetical protein; KEGG: toc:Toce_1927 N-terminal methylation.
     
 0.678
AEG61320.1
KEGG: toc:Toce_1927 N-terminal methylation.
     
 0.590
AEG59338.1
KEGG: drm:Dred_2510 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
     
 0.510
AEG61321.1
PFAM: Type II secretion system F domain; KEGG: dau:Daud_0970 type II secretion system protein.
     
 0.491
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.