STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61334.1KEGG: drm:Dred_1015 hypothetical protein. (124 aa)    
Predicted Functional Partners:
AEG61333.1
TIGRFAM: diguanylate cyclase; PFAM: CBS domain containing protein; GGDEF domain containing protein; KEGG: drm:Dred_1016 diguanylate cyclase; SMART: GGDEF domain containing protein; CBS domain containing protein.
 
     0.967
AEG61852.1
KEGG: drm:Dred_3104 hypothetical protein.
  
     0.667
AEG60948.1
KEGG: drm:Dred_1310 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region.
  
     0.622
AEG59196.1
KEGG: drm:Dred_2696 hypothetical protein.
  
     0.619
AEG59933.1
KEGG: drm:Dred_2122 hypothetical protein.
  
     0.592
AEG59867.1
KEGG: drm:Dred_2170 hypothetical protein.
  
     0.534
AEG59901.1
KEGG: drm:Dred_2149 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; TrkA-C domain protein; SMART: regulatory protein GntR HTH.
  
     0.528
AEG58978.1
PFAM: membrane-bound metal-dependent hydrolase; KEGG: drm:Dred_0844 membrane-bound metal-dependent hydrolase.
  
     0.486
AEG60641.1
KEGG: pth:PTH_1120 hypothetical protein.
  
     0.483
AEG59309.1
KEGG: drm:Dred_2533 signal transduction histidine kinase regulating citrate/malate metabolism.
  
     0.472
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.