STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61351.1PFAM: PfkB domain protein; KEGG: toc:Toce_1876 PfkB domain protein. (320 aa)    
Predicted Functional Partners:
AEG61352.1
Regulatory protein DeoR; KEGG: mta:Moth_0011 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR.
 
  
 0.821
AEG62055.1
PFAM: oxidoreductase domain protein; KEGG: cma:Cmaq_1495 oxidoreductase domain-containing protein.
 
  
 0.791
AEG61350.1
KEGG: ate:Athe_1803 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase.
  
  
 0.789
AEG61341.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: msv:Mesil_3059 xylose isomerase domain protein TIM barrel.
 
  
 0.751
xylB
Xylulokinase; KEGG: dtu:Dtur_0920 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like.
 
  
 0.732
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.726
AEG61353.1
TIGRFAM: ketose-bisphosphate aldolase; KEGG: pam:PANA_2380 FbaA; PFAM: ketose-bisphosphate aldolase class-II.
 
  
 0.684
AEG61348.1
PFAM: extracellular solute-binding protein family 1; KEGG: csa:Csal_2610 extracellular solute-binding protein.
 
  
 0.614
hisA
TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: drm:Dred_2351 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein.
  
    0.606
AEG61340.1
6-phospho-3-hexuloisomerase; KEGG: rru:Rru_A1367 hexulose-6-phosphate isomerase; PFAM: sugar isomerase (SIS).
 
    0.567
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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