STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61352.1Regulatory protein DeoR; KEGG: mta:Moth_0011 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. (257 aa)    
Predicted Functional Partners:
AEG62019.1
1-phosphofructokinase; KEGG: bcz:BCZK1642 tagatose-6-phosphate kinase, phosphofructokinase I; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.962
AEG61351.1
PFAM: PfkB domain protein; KEGG: toc:Toce_1876 PfkB domain protein.
 
  
 0.821
AEG61350.1
KEGG: ate:Athe_1803 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase.
 
  
 0.790
AEG61353.1
TIGRFAM: ketose-bisphosphate aldolase; KEGG: pam:PANA_2380 FbaA; PFAM: ketose-bisphosphate aldolase class-II.
 
  
 0.651
AEG62025.1
Regulatory protein LacI; KEGG: str:Sterm_3542 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI.
  
  
 0.600
AEG59688.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lbf:LBF_0126 short chain dehydrogenase.
 
  
 0.580
AEG61348.1
PFAM: extracellular solute-binding protein family 1; KEGG: csa:Csal_2610 extracellular solute-binding protein.
 
    0.567
AEG59726.1
KEGG: dtu:Dtur_1708 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI.
  
  
 0.561
AEG61346.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_2612 binding-protein-dependent transport systems inner membrane component.
 
   
 0.545
AEG61901.1
TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: drm:Dred_3163 RpiB/LacA/LacB family sugar-phosphate isomerase; PFAM: Ribose/galactose isomerase.
  
  
 0.544
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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