STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61369.1PFAM: protein of unknown function DUF421; KEGG: cce:Ccel_1122 protein of unknown function DUF421. (242 aa)    
Predicted Functional Partners:
AEG61370.1
KEGG: ctc:CTC00416 hypothetical protein.
       0.709
AEG61181.1
Manually curated; TIGRFAM: sporulation protein YtfJ; KEGG: drm:Dred_1138 hypothetical protein; PFAM: Sporulation protein YtfJ.
  
     0.615
AEG60600.1
KEGG: dae:Dtox_0584 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
 
  
 0.577
AEG58407.1
PFAM: GerA spore germination protein; KEGG: drm:Dred_0054 GerA spore germination protein.
 
  
 0.567
AEG60599.1
PFAM: GerA spore germination protein; KEGG: dae:Dtox_0585 GerA spore germination protein.
 
  
 0.567
AEG60519.1
PFAM: GerA spore germination protein; KEGG: drm:Dred_1732 GerA spore germination protein.
 
  
 0.564
AEG60416.1
PFAM: GerA spore germination protein; KEGG: pth:PTH_1840 hypothetical protein.
 
  
 0.556
AEG60805.1
KEGG: drm:Dred_1464 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein.
 
  
 0.542
AEG60794.1
PFAM: GerA spore germination protein; KEGG: drm:Dred_2663 GerA spore germination protein.
 
  
 0.538
AEG60667.1
Sporulation protein YunB; KEGG: drm:Dred_1648 hypothetical protein; TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB-like.
  
     0.531
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.