STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61443.1Manually curated; PFAM: ABC transporter related; KEGG: bay:RBAM_031050 opuBA; SMART: AAA ATPase. (268 aa)    
Predicted Functional Partners:
AEG61444.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: str:Sterm_3032 substrate-binding region of ABC-type glycine betaine transport system.
 
 0.995
AEG61445.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_0275 glycine betaine/L-proline ABC transporter (permease), putative.
 0.994
AEG61394.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mta:Moth_1686 binding-protein dependent transport system inner membrane protein.
 0.987
AEG61395.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mta:Moth_1687 binding-protein dependent transport system inner membrane protein.
 0.987
AEG61393.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: slp:Slip_0633 substrate-binding region of ABC-type glycine betaine transport system.
 
 0.986
AEG60324.1
KEGG: dhd:Dhaf_3150 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    
0.907
AEG61396.1
TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: mta:Moth_1688 glycine betaine/L-proline transport ATP binding subunit; SMART: AAA ATPase; CBS domain containing protein.
  
  
 
0.904
AEG61442.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dae:Dtox_1563 rubredoxin-type Fe(Cys)4 protein.
       0.509
AEG60736.1
KEGG: drm:Dred_1589 ABC-2 type transporter; manually curated; PFAM: ABC-2 type transporter.
 
      0.490
AEG60591.1
KEGG: dsy:DSY4742 hypothetical protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
     
0.486
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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