STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61450.1KEGG: drm:Dred_1578 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin. (234 aa)    
Predicted Functional Partners:
AEG61449.1
PFAM: protein of unknown function DUF610 YibQ; KEGG: drm:Dred_1577 protein of unknown function DUF610, YibQ.
      0.829
AEG61744.1
PFAM: G-protein, gamma-like subunit; KEGG: cth:Cthe_1709 phage-related protein-like protein.
  
    0.499
AEG61451.1
PFAM: ABC transporter related; KEGG: dae:Dtox_2874 ABC transporter related.
  
    0.483
AEG61447.1
PFAM: protein of unknown function DUF86; KEGG: pmo:Pmob_1311 hypothetical protein.
       0.456
AEG61448.1
PFAM: DNA polymerase beta domain protein region; KEGG: pth:PTH_0358 nucleotidyltransferase.
       0.456
AEG59013.1
PFAM: Rhomboid family protein; KEGG: drm:Dred_2900 rhomboid family protein.
  
   0.430
AEG61363.1
KEGG: dhd:Dhaf_2806 hypothetical protein.
    
   0.400
AEG61399.1
KEGG: clj:CLJU_c15710 hypothetical protein.
    
   0.400
murA-2
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.400
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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