STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61464.1NAD(P)H dehydrogenase (quinone); KEGG: pap:PSPA7_4174 hypothetical protein; PFAM: NADPH-dependent FMN reductase. (183 aa)    
Predicted Functional Partners:
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.652
AEG60398.1
PFAM: DSBA oxidoreductase; KEGG: drm:Dred_2656 polyketide biosynthesis dithiol-disulfide isomerase-like protein.
 
    0.575
AEG58869.1
SMART: extracellular solute-binding protein family 3; KEGG: dvm:DvMF_0519 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
 
  
 0.518
AEG59133.1
SMART: extracellular solute-binding protein family 3; KEGG: slp:Slip_1328 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein.
 
  
 0.473
AEG59255.1
KEGG: pth:PTH_1734 NAD(FAD)-dependent dehydrogenases; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein.
     
 0.440
AEG61303.1
KEGG: drm:Dred_1054 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein.
     
 0.440
AEG58430.1
KEGG: drm:Dred_3204 membrane lipoprotein lipid attachment site.
  
  
 0.405
AEG59286.1
KEGG: drm:Dred_2556 ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component.
  
  
 0.405
AEG61440.1
SMART: extracellular solute-binding protein family 3; KEGG: adg:Adeg_0354 NMT1/THI5 like domain protein.
  
  
 0.405
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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