STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61468.1KEGG: dae:Dtox_0793 hypothetical protein. (212 aa)    
Predicted Functional Partners:
AEG61470.1
PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: dae:Dtox_0795 NADH dehydrogenase (ubiquinone) 30 kDa subunit.
 
  
 0.999
AEG61471.1
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dae:Dtox_0796 NADH ubiquinone oxidoreductase 20 kDa subunit.
 
  
 0.989
AEG61469.1
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dae:Dtox_0794 NADH/ubiquinone/plastoquinone (complex I).
 
  
 0.985
AEG61467.1
KEGG: dae:Dtox_0792 respiratory-chain NADH dehydrogenase, subunit 1.
 
  
 0.983
AEG61466.1
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dae:Dtox_0791 NADH/ubiquinone/plastoquinone (complex I).
 
  
 0.975
AEG58801.1
NADH dehydrogenase (quinone); KEGG: pth:PTH_1378 NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
     
 0.425
AEG60634.1
KEGG: drm:Dred_1655 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
     
 0.425
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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