STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61490.1KEGG: drm:Dred_0719 hypothetical protein. (81 aa)    
Predicted Functional Partners:
AEG61630.1
PFAM: small acid-soluble spore protein alpha/beta type; KEGG: drm:Dred_0468 small acid-soluble spore protein, alpha/beta type.
  
   
 0.648
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
   
 0.612
AEG60710.1
Sporulation protein YtxC; KEGG: drm:Dred_1610 hypothetical protein; TIGRFAM: sporulation protein YtxC; PFAM: Sporulation protein YtxC.
  
    0.591
AEG62088.1
Sporulation protein YyaC; KEGG: drm:Dred_3314 hypothetical protein; TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256.
  
   
 0.513
AEG59098.1
KEGG: drm:Dred_2826 hypothetical protein.
  
     0.477
AEG59143.1
KEGG: drm:Dred_2741 phospholipase C zinc-binding protein; PFAM: phospholipase C zinc-binding protein; SMART: phospholipase C zinc-binding protein.
  
     0.452
AEG61663.1
PFAM: protein of unknown function DUF327; KEGG: drm:Dred_0450 hypothetical protein.
  
     0.438
AEG61640.1
Stage II sporulation protein R; KEGG: drm:Dred_0458 pro-sigma-E processing factor spoIIR; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R.
  
     0.423
AEG61301.1
KEGG: drm:Dred_1056 hypothetical protein; TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase.
  
     0.409
AEG61868.1
PFAM: Methyltransferase type 11; KEGG: mar:MAE_13200 putative methyltransferase.
  
    0.406
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.