STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61500.1PFAM: GCN5-related N-acetyltransferase; KEGG: bld:BLi02771 hypothetical protein. (169 aa)    
Predicted Functional Partners:
AEG60843.1
KEGG: dhd:Dhaf_3314 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein.
  
  
 0.666
AEG61501.1
PFAM: VanW family protein; KEGG: dhd:Dhaf_1773 VanW family protein.
 
     0.616
AEG60844.1
PFAM: protein of unknown function DUF107; KEGG: dhd:Dhaf_3316 protein of unknown function DUF107.
  
  
 0.558
AEG61502.1
Hypothetical protein; Manually curated; KEGG: cpc:Cpar_1201 hypothetical protein.
       0.482
AEG61503.1
PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: dae:Dtox_2649 pyruvate phosphate dikinase PEP/pyruvate-binding.
 
     0.403
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.