STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61506.1PFAM: Tetracycline transcriptional regulator QacR-related domain-containing protein; regulatory protein TetR; KEGG: bbe:BBR47_21860 probable transcriptional regulator. (199 aa)    
Predicted Functional Partners:
AEG62004.1
PFAM: regulatory protein TetR; KEGG: dae:Dtox_3827 transcriptional regulator, TetR family.
  
     0.637
AEG61504.1
PFAM: regulatory protein TetR; KEGG: dae:Dtox_2650 transcriptional regulator, TetR family.
  
     0.590
AEG61507.1
PFAM: Methyltransferase type 11; KEGG: nmg:Nmag_3332 methyltransferase type 11.
       0.472
AEG61137.1
PFAM: regulatory protein TetR; KEGG: dhd:Dhaf_3295 transcriptional regulator, TetR family.
  
     0.423
AEG59916.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
      
 0.400
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.