STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61525.1TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; KEGG: drm:Dred_0652 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane. (707 aa)    
Predicted Functional Partners:
AEG61223.1
Nitrate reductase; KEGG: drm:Dred_1114 formate dehydrogenase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.939
AEG61224.1
PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: drm:Dred_1113 formate dehydrogenase.
     
 0.939
AEG61407.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: toc:Toce_0243 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.931
AEG59136.1
TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; KEGG: tjr:TherJR_1937 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane.
  
  
0.928
AEG59976.1
PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: det:DET1173 FwdE family protein.
  
  
  0.918
AEG60921.1
KEGG: drm:Dred_1330 formate dehydrogenase; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein.
  
  
  0.913
AEG58714.1
KEGG: drm:Dred_1115 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
    
 0.908
AEG60828.1
KEGG: drm:Dred_0462 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
    
 0.908
AEG61222.1
KEGG: drm:Dred_1115 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
    
 0.908
AEG61635.1
KEGG: drm:Dred_0462 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
    
 0.908
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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