STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61545.1PFAM: protein of unknown function DUF1290; KEGG: drm:Dred_0682 hypothetical protein. (113 aa)    
Predicted Functional Partners:
AEG61546.1
PFAM: protein of unknown function DUF881; KEGG: drm:Dred_0681 hypothetical protein.
 
  
 0.982
AEG61547.1
PFAM: protein of unknown function DUF881; KEGG: drm:Dred_0680 hypothetical protein.
 
  
 0.982
AEG61548.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
  
 0.867
AEG61544.1
PFAM: cell division protein FtsA; KEGG: drm:Dred_0683 cell division protein FtsA.
     
 0.720
AEG58310.1
KEGG: drm:Dred_0003 RNA-binding S4 domain-containing protein.
   
    0.689
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
       0.682
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.674
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
       0.645
AEG58426.1
PFAM: 3D domain-containing protein; G5 domain protein; protein of unknown function DUF348; KEGG: drm:Dred_0070 3D domain-containing protein.
  
     0.571
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
     
 0.557
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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