STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61568.1Small GTP-binding protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (646 aa)    
Predicted Functional Partners:
AEG61569.1
PFAM: FeoA family protein; KEGG: drm:Dred_0647 FeoA family protein.
 
  
 0.967
AEG59170.1
PFAM: FeoA family protein; KEGG: drm:Dred_2718 FeoA family protein.
 
  
 0.864
AEG59151.1
PFAM: FeoA family protein; KEGG: dae:Dtox_1656 FeoA family protein.
 
  
 0.783
AEG61567.1
KEGG: drm:Dred_0649 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family.
       0.752
AEG61566.1
PFAM: ferric-uptake regulator; KEGG: drm:Dred_0650 ferric uptake regulator family protein; Belongs to the Fur family.
     
 0.579
AEG59150.1
PFAM: FeoA family protein; KEGG: drm:Dred_2725 FeoA family protein.
  
  
 0.570
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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