STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61571.1KEGG: drm:Dred_0646 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 18; SMART: chitinase II. (349 aa)    
Predicted Functional Partners:
AEG59859.1
PFAM: glycosyl transferase family 2; KEGG: gyc:GYMC61_2190 glycosyl transferase family 2.
      0.714
AEG60725.1
KEGG: drm:Dred_1605 polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; PFAM: polysaccharide deacetylase.
 
    
 0.666
AEG60518.1
KEGG: drm:Dred_1733 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
     0.501
AEG61574.1
PFAM: polysaccharide deacetylase; KEGG: drm:Dred_0643 polysaccharide deacetylase.
    
 0.472
AEG61572.1
PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: drm:Dred_0645 acid phosphatase/vanadium-dependent haloperoxidase related.
       0.470
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
       0.454
AEG61573.1
PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_0644 major facilitator transporter.
       0.454
AEG60517.1
KEGG: drm:Dred_1734 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
  
     0.424
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.