STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61601.1Cupin 2 conserved barrel domain protein; KEGG: nth:Nther_2571 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (190 aa)    
Predicted Functional Partners:
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.659
AEG61600.1
PFAM: extracellular solute-binding protein family 5; KEGG: bts:Btus_2779 extracellular solute-binding protein family 5.
     
 0.633
AEG59916.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
     
 0.619
AEG58392.1
Cyclic nucleotide-binding protein; KEGG: pth:PTH_2806 transcriptional regulator; PFAM: cyclic nucleotide-binding; sigma-54 factor interaction domain-containing protein; SMART: cyclic nucleotide-binding.
  
  
 0.568
AEG58759.1
KEGG: drm:Dred_2758 UbiC transcription regulator-associated domain-containing protein; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.536
AEG58867.1
KEGG: drm:Dred_2751 UbiC transcription regulator-associated domain-containing protein; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.536
AEG59901.1
KEGG: drm:Dred_2149 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; TrkA-C domain protein; SMART: regulatory protein GntR HTH.
  
  
 0.536
AEG62052.1
KEGG: dhd:Dhaf_2626 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.536
AEG61598.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr6673 ATP-dependent peptide transporter membrane subunit.
   
   0.532
AEG61599.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dba:Dbac_2921 binding-protein-dependent transport systems inner membrane component.
     
 0.512
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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