STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61622.1KEGG: drm:Dred_0475 hypothetical protein. (318 aa)    
Predicted Functional Partners:
AEG59140.1
KEGG: drm:Dred_2743 hypothetical protein.
  
     0.540
AEG60503.1
KEGG: drm:Dred_1739 hypothetical protein.
  
     0.534
AEG59458.1
PFAM: protein of unknown function DUF164; KEGG: drm:Dred_2458 hypothetical protein.
  
     0.523
AEG59649.1
PFAM: Protein of unknown function DUF2275, transmembrane; KEGG: drm:Dred_0040 putative transmembrane anti-sigma factor.
  
     0.515
AEG60792.1
KEGG: drm:Dred_2666 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
  
     0.478
AEG58490.1
KEGG: drm:Dred_0119 hypothetical protein; TIGRFAM: spore cortex biosynthesis protein YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like.
  
     0.476
AEG61621.1
KEGG: drm:Dred_0477 hypothetical protein.
       0.476
AEG59850.1
PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2172 hypothetical protein.
 
     0.463
AEG58404.1
KEGG: drm:Dred_0051 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
     0.446
AEG59620.1
PFAM: Protein of unknown function DUF2225; KEGG: drm:Dred_2320 tetratricopeptide domain-containing protein.
  
     0.440
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.