STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61651.1PFAM: oxidoreductase/nitrogenase component 1; KEGG: drm:Dred_2815 nitrogenase; Belongs to the NifD/NifK/NifE/NifN family. (481 aa)    
Predicted Functional Partners:
AEG61650.1
PFAM: Radical SAM domain protein; KEGG: drm:Dred_2814 radical SAM domain-containing protein.
  
 0.996
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.985
AEG61652.1
KEGG: drm:Dred_2816 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; Belongs to the NifD/NifK/NifE/NifN family.
   
0.957
AEG61656.1
PFAM: nitrogen regulatory protein P-II; KEGG: drm:Dred_2820 nitrogen regulatory protein P-II.
 
 
 0.948
AEG61648.1
PFAM: Nitrogenase iron-iron accessory protein AnfO; KEGG: drm:Dred_2813 hypothetical protein.
 
   
 0.910
AEG61654.1
KEGG: drm:Dred_2818 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1.
   
0.879
AEG61655.1
PFAM: nitrogen regulatory protein P-II; KEGG: drm:Dred_2819 nitrogen regulatory protein P-II.
 
 
 0.870
AEG61649.1
PFAM: Sucraseferredoxin family protein; KEGG: dae:Dtox_1031 ferredoxin, 2Fe-2S.
 
     0.821
AEG60781.1
PFAM: Nitrogenase iron-iron accessory protein AnfO; KEGG: drm:Dred_2813 hypothetical protein.
 
   
 0.778
AEG61653.1
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
    
0.764
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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