STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61685.1KEGG: drm:Dred_2589 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin. (192 aa)    
Predicted Functional Partners:
AEG61684.1
KEGG: cag:Cagg_1995 protein of unknown function UPF0052 and CofD.
       0.773
AEG61686.1
KEGG: ath:AT2G38250 DNA-binding protein-related.
       0.746
AEG60866.1
KEGG: cth:Cthe_1810 peptidase M56, BlaR1; PFAM: peptidase M56 BlaR1; cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin.
  
     0.745
AEG61460.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: drm:Dred_1644 copper amine oxidase domain-containing protein.
 
      0.642
AEG61687.1
Hypothetical protein; KEGG: dmo:Dmoj_GI19701 GI19701 gene product from transcript GI19701-RA.
       0.489
AEG61688.1
PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: cja:CJA_1396 putative hemolysin.
       0.486
AEG61689.1
KEGG: drm:Dred_1223 hypothetical protein.
       0.486
AEG59302.1
PFAM: Peptidase M23; KEGG: drm:Dred_2540 peptidase M23B.
 
   0.449
AEG61884.1
PFAM: Peptidase M23; KEGG: drm:Dred_3146 peptidase M23B.
 
   0.438
AEG61823.1
PFAM: Peptidase M23; KEGG: drm:Dred_3071 peptidase M23B.
 
   0.428
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.