STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61691.1KEGG: bbe:BBR47_06310 hypothetical protein. (96 aa)    
Predicted Functional Partners:
AEG61690.1
KEGG: amt:Amet_2433 hypothetical protein.
       0.782
AEG61692.1
KEGG: gka:GK0543 hypothetical protein.
       0.761
AEG59630.1
PFAM: lipolytic protein G-D-S-L family; KEGG: drm:Dred_2310 GDSL family lipase.
  
 
 0.731
AEG59698.1
PFAM: lipolytic protein G-D-S-L family; KEGG: amt:Amet_1979 GDSL family lipase.
  
 
 0.731
AEG61862.1
PFAM: lipolytic protein G-D-S-L family; copper amine oxidase-like domain-containing protein; KEGG: clj:CLJU_c08400 putative SGNH hydrolase.
  
 
 0.731
AEG61693.1
KEGG: dhd:Dhaf_4814 hypothetical protein.
       0.713
AEG59213.1
KEGG: mtb:TBMG_02531 hypothetical protein.
  
 
 0.601
AEG59776.1
KEGG: cpy:Cphy_3870 hypothetical protein.
  
 
 0.601
AEG61750.1
TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: ccb:Clocel_0785 bacteriophage QLRG family, putative DNA packaging.
  
 
 0.601
AEG61694.1
KEGG: gym:GYMC10_5372 phage uncharacterized protein, XkdX family; TIGRFAM: phage uncharacterized protein, XkdX family; PFAM: uncharacterised protein XkdX.
       0.573
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.